Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AC005332.8-201ENST00000622750 2735 ntBASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J3Q9H1A7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 TSPY23P-201ENST00000440136 739 ntBASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 AP003097.1-201ENST00000530657 1135 ntBASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 AC008403.3-201ENST00000598924 454 ntBASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 AL354751.1-201ENST00000412768 1863 ntBASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR2J3Q9H1A7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ANO7L1-203ENST00000602586 1720 ntBASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms