Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPBQ9H078 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPBQ9H078 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPBQ9H078 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPBQ9H078 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLPBQ9H078 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLPBQ9H078 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPBQ9H078 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPBQ9H078 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPBQ9H078 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPBQ9H078 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPBQ9H078 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLPBQ9H078 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.93■□□□□ 0.62
CLPBQ9H078 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPBQ9H078 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CLPBQ9H078 LIN28AP1-201ENST00000429574 405 ntBASIC18.93■□□□□ 0.62
CLPBQ9H078 DUX4L26-201ENST00000489078 1255 ntBASIC18.93■□□□□ 0.62
CLPBQ9H078 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.93■□□□□ 0.62
CLPBQ9H078 AC006011.2-201ENST00000621313 1158 ntBASIC18.93■□□□□ 0.62
CLPBQ9H078 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CLPBQ9H078 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPBQ9H078 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLPBQ9H078 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLPBQ9H078 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPBQ9H078 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLPBQ9H078 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLPBQ9H078 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPBQ9H078 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.92■□□□□ 0.62
CLPBQ9H078 FEM1AP3-201ENST00000403722 1741 ntBASIC18.92■□□□□ 0.62
CLPBQ9H078 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLPBQ9H078 TSPY23P-201ENST00000440136 739 ntBASIC18.92■□□□□ 0.62
CLPBQ9H078 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
CLPBQ9H078 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.92■□□□□ 0.62
CLPBQ9H078 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.92■□□□□ 0.62
CLPBQ9H078 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPBQ9H078 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CLPBQ9H078 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPBQ9H078 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLPBQ9H078 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.92■□□□□ 0.62
CLPBQ9H078 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CLPBQ9H078 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPBQ9H078 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.91■□□□□ 0.62
CLPBQ9H078 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLPBQ9H078 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.91■□□□□ 0.62
CLPBQ9H078 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPBQ9H078 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLPBQ9H078 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms