Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AC022494.1-201ENST00000466044 728 ntBASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 ALG1L5P-201ENST00000482043 771 ntBASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 AL353692.3-201ENST00000407031 1396 ntBASIC18.8■□□□□ 0.6
LRFN3Q9BTN0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC008735.5-201ENST00000623544 497 ntBASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN3Q9BTN0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 AL008721.1-201ENST00000609964 604 ntBASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 AC093028.1-201ENST00000622998 982 ntBASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN3Q9BTN0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms