Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 AL032819.2-201ENST00000624543 2162 ntBASIC16.81■□□□□ 0.28
USB1Q9BQ65 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 KRT8P9-201ENST00000558927 1449 ntBASIC16.8■□□□□ 0.28
USB1Q9BQ65 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 LIN28AP1-201ENST00000429574 405 ntBASIC16.8■□□□□ 0.28
USB1Q9BQ65 AL137013.1-201ENST00000432946 1228 ntBASIC16.8■□□□□ 0.28
USB1Q9BQ65 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USB1Q9BQ65 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.8■□□□□ 0.28
USB1Q9BQ65 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 HMGA1P5-201ENST00000412453 271 ntBASIC16.79■□□□□ 0.28
USB1Q9BQ65 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 SLC25A3P1-201ENST00000443844 931 ntBASIC16.79■□□□□ 0.28
USB1Q9BQ65 AC008040.2-201ENST00000461049 708 ntBASIC16.79■□□□□ 0.28
USB1Q9BQ65 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CKBP1-201ENST00000565489 1086 ntBASIC16.79■□□□□ 0.28
USB1Q9BQ65 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USB1Q9BQ65 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.79■□□□□ 0.28
USB1Q9BQ65 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 TSPY21P-201ENST00000433481 731 ntBASIC16.78■□□□□ 0.28
USB1Q9BQ65 AC090142.2-201ENST00000483263 416 ntBASIC16.78■□□□□ 0.28
USB1Q9BQ65 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 KRT8P41-201ENST00000533985 1514 ntBASIC16.78■□□□□ 0.28
USB1Q9BQ65 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 AC125437.2-201ENST00000625180 2167 ntBASIC16.78■□□□□ 0.28
USB1Q9BQ65 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms