Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDNQ99608 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NDNQ99608 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.9■□□□□ 0.62
NDNQ99608 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NDNQ99608 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDNQ99608 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NDNQ99608 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDNQ99608 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.89■□□□□ 0.62
NDNQ99608 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
NDNQ99608 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
NDNQ99608 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.89■□□□□ 0.61
NDNQ99608 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.89■□□□□ 0.61
NDNQ99608 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.89■□□□□ 0.61
NDNQ99608 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.89■□□□□ 0.61
NDNQ99608 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.89■□□□□ 0.61
NDNQ99608 HTR7P1-201ENST00000538670 1336 ntBASIC18.89■□□□□ 0.61
NDNQ99608 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.89■□□□□ 0.61
NDNQ99608 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.89■□□□□ 0.61
NDNQ99608 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.89■□□□□ 0.61
NDNQ99608 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDNQ99608 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
NDNQ99608 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.88■□□□□ 0.61
NDNQ99608 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NDNQ99608 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NDNQ99608 AC106820.2-201ENST00000563775 3264 ntBASIC18.88■□□□□ 0.61
NDNQ99608 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 NIFKP9-201ENST00000419265 221 ntBASIC18.88■□□□□ 0.61
NDNQ99608 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.88■□□□□ 0.61
NDNQ99608 RPS2P4-201ENST00000476944 856 ntBASIC18.88■□□□□ 0.61
NDNQ99608 RPPH1-201ENST00000516869 333 ntBASIC18.88■□□□□ 0.61
NDNQ99608 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.88■□□□□ 0.61
NDNQ99608 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.88■□□□□ 0.61
NDNQ99608 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.88■□□□□ 0.61
NDNQ99608 AL445675.2-201ENST00000620291 557 ntBASIC18.88■□□□□ 0.61
NDNQ99608 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.88■□□□□ 0.61
NDNQ99608 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
NDNQ99608 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.88■□□□□ 0.61
NDNQ99608 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NDNQ99608 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDNQ99608 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.88■□□□□ 0.61
NDNQ99608 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.87■□□□□ 0.61
NDNQ99608 TSPY20P-201ENST00000450910 630 ntBASIC18.87■□□□□ 0.61
NDNQ99608 AP002982.1-201ENST00000492365 877 ntBASIC18.87■□□□□ 0.61
NDNQ99608 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.87■□□□□ 0.61
NDNQ99608 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NDNQ99608 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NDNQ99608 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 AC093525.10-201ENST00000625130 1569 ntBASIC18.87■□□□□ 0.61
NDNQ99608 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDNQ99608 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.87■□□□□ 0.61
NDNQ99608 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NDNQ99608 WIZP1-201ENST00000531444 2299 ntBASIC18.86■□□□□ 0.61
NDNQ99608 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
NDNQ99608 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms