Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 AP006587.1-201ENST00000534129 1502 ntBASIC15.3■□□□□ 0.04
RAB40CQ96S21 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 AC126763.1-201ENST00000552015 2118 ntBASIC15.3■□□□□ 0.04
RAB40CQ96S21 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 IKBKGP1-201ENST00000612193 1073 ntBASIC15.3■□□□□ 0.04
RAB40CQ96S21 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40CQ96S21 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40CQ96S21 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 FZD10-202ENST00000539839 3282 ntBASIC15.29■□□□□ 0.04
RAB40CQ96S21 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40CQ96S21 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40CQ96S21 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 LSM12P1-201ENST00000411836 588 ntBASIC15.28■□□□□ 0.04
RAB40CQ96S21 AL512625.2-201ENST00000417533 625 ntBASIC15.28■□□□□ 0.04
RAB40CQ96S21 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 AL137784.2-201ENST00000607332 1000 ntBASIC15.28■□□□□ 0.04
RAB40CQ96S21 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms