Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 KRT18P1-202ENST00000452408 1331 ntBASIC16.6■□□□□ 0.25
PCNX1Q96RV3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 AL136038.4-201ENST00000603606 1261 ntBASIC16.6■□□□□ 0.25
PCNX1Q96RV3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.6■□□□□ 0.25
PCNX1Q96RV3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 AL022342.1-201ENST00000400363 863 ntBASIC16.59■□□□□ 0.25
PCNX1Q96RV3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 AL023284.2-201ENST00000405850 579 ntBASIC16.59■□□□□ 0.25
PCNX1Q96RV3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 AP002414.4-201ENST00000589764 1148 ntBASIC16.59■□□□□ 0.25
PCNX1Q96RV3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 AC120114.3-201ENST00000611923 658 ntBASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 TOB2P1-201ENST00000469761 992 ntBASIC16.59■□□□□ 0.25
PCNX1Q96RV3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCNX1Q96RV3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCNX1Q96RV3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 GABARAPL3-202ENST00000624044 1851 ntBASIC16.58■□□□□ 0.24
PCNX1Q96RV3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 AC074051.2-201ENST00000565115 352 ntBASIC16.58■□□□□ 0.24
PCNX1Q96RV3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.58■□□□□ 0.24
PCNX1Q96RV3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 KRT16P4-201ENST00000453883 522 ntBASIC16.57■□□□□ 0.24
PCNX1Q96RV3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 AP000867.3-201ENST00000524675 377 ntBASIC16.57■□□□□ 0.24
PCNX1Q96RV3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.57■□□□□ 0.24
PCNX1Q96RV3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.57■□□□□ 0.24
PCNX1Q96RV3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCNX1Q96RV3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms