Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNAJB3-202ENST00000449667 1266 ntBASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 AC091607.1-201ENST00000490318 1060 ntBASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 AC027601.4-201ENST00000611259 610 ntBASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD1Q96PZ7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC211486.1-202ENST00000416371 468 ntBASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC211476.1-201ENST00000503899 468 ntBASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD1Q96PZ7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 AL160286.2-201ENST00000567150 934 ntBASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 AC005332.3-201ENST00000589904 676 ntBASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 AL391807.1-203ENST00000604392 2365 ntBASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD1Q96PZ7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 LINC01711-201ENST00000598340 967 ntBASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD1Q96PZ7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSMD1Q96PZ7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD1Q96PZ7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD1Q96PZ7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CSMD1Q96PZ7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.01■□□□□ 0.15
CSMD1Q96PZ7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms