Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.94□□□□□ -0.18
ODF3Q96PU9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 AL162741.1-201ENST00000565563 1558 ntBASIC13.93□□□□□ -0.18
ODF3Q96PU9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 AL135905.2-201ENST00000584934 1404 ntBASIC13.93□□□□□ -0.18
ODF3Q96PU9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 RPS2P4-201ENST00000476944 856 ntBASIC13.93□□□□□ -0.18
ODF3Q96PU9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 C1QBPP2-201ENST00000528754 825 ntBASIC13.93□□□□□ -0.18
ODF3Q96PU9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF3Q96PU9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ODF3Q96PU9 BCL2-203ENST00000589955 5011 ntBASIC13.92□□□□□ -0.18
ODF3Q96PU9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 MTMR9LP-203ENST00000426597 1545 ntBASIC13.92□□□□□ -0.18
ODF3Q96PU9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 CKBP1-201ENST00000565489 1086 ntBASIC13.92□□□□□ -0.18
ODF3Q96PU9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 AF186192.3-201ENST00000583427 947 ntBASIC13.92□□□□□ -0.18
ODF3Q96PU9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 AC011298.2-201ENST00000617989 482 ntBASIC13.92□□□□□ -0.18
ODF3Q96PU9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF3Q96PU9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
ODF3Q96PU9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms