Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf85Q96MD7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C9orf85Q96MD7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AC126763.1-201ENST00000552015 2118 ntBASIC13.67□□□□□ -0.22
C9orf85Q96MD7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AL355802.2-201ENST00000402069 882 ntBASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AC026366.1-201ENST00000488803 879 ntBASIC13.67□□□□□ -0.22
C9orf85Q96MD7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 MTMR9LP-203ENST00000426597 1545 ntBASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf85Q96MD7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ABALON-201ENST00000629058 1903 ntBASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 AC239809.2-201ENST00000415381 517 ntBASIC13.66□□□□□ -0.22
C9orf85Q96MD7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 PRSS44-201ENST00000515154 1146 ntBASIC13.66□□□□□ -0.22
C9orf85Q96MD7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 AL445675.2-201ENST00000620291 557 ntBASIC13.66□□□□□ -0.22
C9orf85Q96MD7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.66□□□□□ -0.22
C9orf85Q96MD7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C9orf85Q96MD7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 KRT8P11-201ENST00000409686 1436 ntBASIC13.65□□□□□ -0.22
C9orf85Q96MD7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C9orf85Q96MD7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms