Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 KRT17P1-201ENST00000399211 1546 ntBASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COX4I2Q96KJ9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 KRT17P3-201ENST00000420566 1262 ntBASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 RN7SL471P-201ENST00000580476 299 ntBASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
COX4I2Q96KJ9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
COX4I2Q96KJ9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 KRT18P21-201ENST00000515767 1272 ntBASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.45■□□□□ 0.38
COX4I2Q96KJ9 AL391005.1-201ENST00000623953 2435 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms