Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
DDX11Q96FC9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
DDX11Q96FC9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
DDX11Q96FC9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 ATP5G1P1-201ENST00000448724 379 ntBASIC22.36■■□□□ 1.17
DDX11Q96FC9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 ECEL1P2-202ENST00000465689 757 ntBASIC22.36■■□□□ 1.17
DDX11Q96FC9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX11Q96FC9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
DDX11Q96FC9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 AC020763.4-201ENST00000623414 4170 ntBASIC22.35■■□□□ 1.17
DDX11Q96FC9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 TSPY14P-201ENST00000303979 915 ntBASIC22.35■■□□□ 1.17
DDX11Q96FC9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.35■■□□□ 1.17
DDX11Q96FC9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX11Q96FC9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 AC128688.1-201ENST00000487626 519 ntBASIC22.34■■□□□ 1.17
DDX11Q96FC9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 AC010203.1-204ENST00000548782 407 ntBASIC22.34■■□□□ 1.17
DDX11Q96FC9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 AC011298.2-201ENST00000617989 482 ntBASIC22.34■■□□□ 1.17
DDX11Q96FC9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX11Q96FC9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX11Q96FC9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 RCC2P6-201ENST00000526625 1557 ntBASIC22.33■■□□□ 1.17
DDX11Q96FC9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 CROCCP3-202ENST00000420820 1947 ntBASIC22.33■■□□□ 1.17
DDX11Q96FC9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 AC104076.2-201ENST00000448912 469 ntBASIC22.33■■□□□ 1.17
DDX11Q96FC9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX11Q96FC9 AL160286.2-201ENST00000567150 934 ntBASIC22.33■■□□□ 1.17
DDX11Q96FC9 AP000692.2-201ENST00000608391 879 ntBASIC22.33■■□□□ 1.17
DDX11Q96FC9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX11Q96FC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DDX11Q96FC9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms