Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 KRT8P32-201ENST00000512863 1461 ntBASIC19.94■□□□□ 0.78
TRIM11Q96F44 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 FAM207BP-201ENST00000447172 505 ntBASIC19.94■□□□□ 0.78
TRIM11Q96F44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 CKBP1-201ENST00000565489 1086 ntBASIC19.94■□□□□ 0.78
TRIM11Q96F44 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM11Q96F44 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM11Q96F44 AC079598.2-202ENST00000546624 1451 ntBASIC19.93■□□□□ 0.78
TRIM11Q96F44 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 MIR6786-201ENST00000616843 113 ntBASIC19.93■□□□□ 0.78
TRIM11Q96F44 AC130371.2-201ENST00000619443 611 ntBASIC19.93■□□□□ 0.78
TRIM11Q96F44 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM11Q96F44 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.93■□□□□ 0.78
TRIM11Q96F44 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM11Q96F44 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 AC005082.1-201ENST00000413042 2259 ntBASIC19.92■□□□□ 0.78
TRIM11Q96F44 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 MYC-208ENST00000641036 567 ntBASIC19.92■□□□□ 0.78
TRIM11Q96F44 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 FSCN1P1-201ENST00000568912 1481 ntBASIC19.92■□□□□ 0.78
TRIM11Q96F44 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM11Q96F44 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM11Q96F44 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 BCL2-203ENST00000589955 5011 ntBASIC19.91■□□□□ 0.78
TRIM11Q96F44 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC020763.4-201ENST00000623414 4170 ntBASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC009113.1-201ENST00000570267 2443 ntBASIC19.91■□□□□ 0.78
TRIM11Q96F44 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms