Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2E3Q969T4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.14■□□□□ 0.49
UBE2E3Q969T4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 AL031598.1-201ENST00000561511 1773 ntBASIC18.14■□□□□ 0.49
UBE2E3Q969T4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE2E3Q969T4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 MIR4785-201ENST00000585005 73 ntBASIC18.13■□□□□ 0.49
UBE2E3Q969T4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2E3Q969T4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 HEIH-201ENST00000623091 1652 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 AL512353.2-201ENST00000448759 1962 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 AC097488.1-201ENST00000507834 756 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 REXO1L12P-201ENST00000622156 912 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 KRT8P32-201ENST00000512863 1461 ntBASIC18.12■□□□□ 0.49
UBE2E3Q969T4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2E3Q969T4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms