Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 AL160286.2-201ENST00000567150 934 ntBASIC14.9□□□□□ -0.02
NPIPB3Q92617 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPB3Q92617 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB3Q92617 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.89□□□□□ -0.03
NPIPB3Q92617 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 PKD1P1-201ENST00000458669 6805 ntBASIC14.89□□□□□ -0.03
NPIPB3Q92617 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 AC026471.1-201ENST00000564629 3026 ntBASIC14.89□□□□□ -0.03
NPIPB3Q92617 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 POM121L13P-201ENST00000422362 380 ntBASIC14.89□□□□□ -0.03
NPIPB3Q92617 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB3Q92617 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPIPB3Q92617 NBPF21P-201ENST00000425093 1451 ntBASIC14.89□□□□□ -0.03
NPIPB3Q92617 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.88□□□□□ -0.03
NPIPB3Q92617 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 BICD1-207ENST00000551848 1962 ntBASIC14.88□□□□□ -0.03
NPIPB3Q92617 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.88□□□□□ -0.03
NPIPB3Q92617 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.88□□□□□ -0.03
NPIPB3Q92617 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB3Q92617 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB3Q92617 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms