Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3S1Q92572 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3S1Q92572 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP3S1Q92572 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
AP3S1Q92572 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP3S1Q92572 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S1Q92572 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3S1Q92572 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.62■□□□□ 0.25
AP3S1Q92572 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
AP3S1Q92572 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP3S1Q92572 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP3S1Q92572 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
AP3S1Q92572 LINC02228-203ENST00000641970 1355 ntBASIC16.62■□□□□ 0.25
AP3S1Q92572 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
AP3S1Q92572 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S1Q92572 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 AC099398.1-201ENST00000567919 2776 ntBASIC16.61■□□□□ 0.25
AP3S1Q92572 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
AP3S1Q92572 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP3S1Q92572 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
AP3S1Q92572 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
AP3S1Q92572 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.61■□□□□ 0.25
AP3S1Q92572 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3S1Q92572 PBX2P1-201ENST00000493219 1291 ntBASIC16.61■□□□□ 0.25
AP3S1Q92572 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 AF213884.3-201ENST00000563833 479 ntBASIC16.61■□□□□ 0.25
AP3S1Q92572 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
AP3S1Q92572 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3S1Q92572 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
AP3S1Q92572 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 AC012317.2-201ENST00000623305 2251 ntBASIC16.61■□□□□ 0.25
AP3S1Q92572 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
AP3S1Q92572 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S1Q92572 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3S1Q92572 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
AP3S1Q92572 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 TFP1-202ENST00000475455 1573 ntBASIC16.6■□□□□ 0.25
AP3S1Q92572 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP3S1Q92572 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
AP3S1Q92572 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S1Q92572 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP3S1Q92572 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.6■□□□□ 0.25
AP3S1Q92572 TERF1P2-201ENST00000583350 1212 ntBASIC16.6■□□□□ 0.25
AP3S1Q92572 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S1Q92572 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3S1Q92572 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
AP3S1Q92572 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S1Q92572 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S1Q92572 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
AP3S1Q92572 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms