Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SLC25A1P1-201ENST00000528351 927 ntBASIC32.28■■■□□ 2.76
TRIM41Q8WV44 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM41Q8WV44 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC32.28■■■□□ 2.76
TRIM41Q8WV44 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM41Q8WV44 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM41Q8WV44 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC32.28■■■□□ 2.76
TRIM41Q8WV44 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 CA15P1-201ENST00000481698 905 ntBASIC32.27■■■□□ 2.76
TRIM41Q8WV44 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 MIR3180-1-201ENST00000580374 94 ntBASIC32.27■■■□□ 2.76
TRIM41Q8WV44 MIR3180-3-201ENST00000584616 94 ntBASIC32.27■■■□□ 2.76
TRIM41Q8WV44 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM41Q8WV44 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
TRIM41Q8WV44 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
TRIM41Q8WV44 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 TSPY12P-201ENST00000421279 868 ntBASIC32.26■■■□□ 2.75
TRIM41Q8WV44 AL353719.1-201ENST00000566847 864 ntBASIC32.26■■■□□ 2.75
TRIM41Q8WV44 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 AC055717.3-201ENST00000622967 595 ntBASIC32.26■■■□□ 2.75
TRIM41Q8WV44 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 ADM-207ENST00000530439 1839 ntTSL 2 BASIC32.26■■■□□ 2.75
TRIM41Q8WV44 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 TSPY19P-201ENST00000418461 509 ntBASIC32.25■■■□□ 2.75
TRIM41Q8WV44 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 TSPY18P-201ENST00000441642 509 ntBASIC32.25■■■□□ 2.75
TRIM41Q8WV44 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC32.25■■■□□ 2.75
TRIM41Q8WV44 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 GOLGA6L5P-202ENST00000515341 1828 ntBASIC32.24■■■□□ 2.75
TRIM41Q8WV44 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 IL9RP2-201ENST00000423948 1312 ntBASIC32.24■■■□□ 2.75
TRIM41Q8WV44 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC32.24■■■□□ 2.75
TRIM41Q8WV44 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 TSPY17P-201ENST00000450329 467 ntBASIC32.23■■■□□ 2.75
TRIM41Q8WV44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 HYMAI.1-201ENST00000620949 238 ntBASIC32.23■■■□□ 2.75
TRIM41Q8WV44 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM41Q8WV44 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 COX10-202ENST00000429152 875 ntTSL 2 BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 AC010653.2-201ENST00000623505 997 ntBASIC32.22■■■□□ 2.75
TRIM41Q8WV44 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 LINC01311-201ENST00000565162 1445 ntBASIC32.22■■■□□ 2.75
TRIM41Q8WV44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM41Q8WV44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
TRIM41Q8WV44 GAS2L1P1-201ENST00000420145 1480 ntBASIC32.21■■■□□ 2.75
TRIM41Q8WV44 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms