Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 VENTXP5-201ENST00000523979 775 ntBASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 AL136038.3-201ENST00000561909 1096 ntBASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 AC093458.2-201ENST00000623150 629 ntBASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHKBP1Q8TBC3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ZNF444P1-201ENST00000559497 298 ntBASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHKBP1Q8TBC3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 LINC01311-201ENST00000565162 1445 ntBASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 AP000974.1-201ENST00000623909 2387 ntBASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHKBP1Q8TBC3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.77■□□□□ 0.75
SHKBP1Q8TBC3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.77■□□□□ 0.75
SHKBP1Q8TBC3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHKBP1Q8TBC3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms