Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.76■□□□□ 0.43
SNIP1Q8TAD8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 TSPY12P-201ENST00000421279 868 ntBASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 RNF126P1-202ENST00000569893 925 ntBASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 AL157888.1-201ENST00000631930 593 ntBASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNIP1Q8TAD8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 MIR3917-201ENST00000580971 93 ntBASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 AC090616.6-201ENST00000582640 721 ntBASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 MIR3180-5-201ENST00000583743 153 ntBASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 AC138894.3-201ENST00000603787 634 ntBASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 AC064862.7-201ENST00000604520 867 ntBASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SNIP1Q8TAD8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNIP1Q8TAD8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms