Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LINS1Q8NG48 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.61■■□□□ 1.37
LINS1Q8NG48 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LINS1Q8NG48 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LINS1Q8NG48 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 SPDYE15P-201ENST00000424157 909 ntBASIC23.6■■□□□ 1.37
LINS1Q8NG48 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 AC112497.1-201ENST00000624824 639 ntBASIC23.6■■□□□ 1.37
LINS1Q8NG48 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LINS1Q8NG48 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LINS1Q8NG48 HOXB1-202ENST00000577092 1414 ntBASIC23.59■■□□□ 1.37
LINS1Q8NG48 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 HYMAI.1-201ENST00000620949 238 ntBASIC23.59■■□□□ 1.37
LINS1Q8NG48 HEIH-201ENST00000623091 1652 ntBASIC23.59■■□□□ 1.37
LINS1Q8NG48 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LINS1Q8NG48 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
LINS1Q8NG48 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LINS1Q8NG48 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LINS1Q8NG48 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LINS1Q8NG48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.58■■□□□ 1.37
LINS1Q8NG48 AL671277.2-201ENST00000458060 996 ntBASIC23.58■■□□□ 1.37
LINS1Q8NG48 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.58■■□□□ 1.37
LINS1Q8NG48 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LINS1Q8NG48 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LINS1Q8NG48 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
LINS1Q8NG48 KRT8P7-201ENST00000533003 1432 ntBASIC23.58■■□□□ 1.36
LINS1Q8NG48 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.58■■□□□ 1.36
LINS1Q8NG48 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LINS1Q8NG48 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
LINS1Q8NG48 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LINS1Q8NG48 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.56■■□□□ 1.36
LINS1Q8NG48 AC112907.2-201ENST00000448639 330 ntBASIC23.56■■□□□ 1.36
LINS1Q8NG48 RASA4DP-201ENST00000460726 1199 ntBASIC23.56■■□□□ 1.36
LINS1Q8NG48 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.56■■□□□ 1.36
LINS1Q8NG48 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LINS1Q8NG48 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms