Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 AC010947.1-201ENST00000623454 693 ntBASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 AC083906.6-201ENST00000641366 219 ntBASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC148Q8NFR7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CCDC148Q8NFR7 AL512353.2-201ENST00000448759 1962 ntBASIC21.7■■□□□ 1.07
CCDC148Q8NFR7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 AC128688.1-201ENST00000487626 519 ntBASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 AL353719.1-201ENST00000566847 864 ntBASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC148Q8NFR7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 AC098818.2-201ENST00000564925 2320 ntBASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 AC092338.2-201ENST00000568827 1415 ntBASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 KRT8P32-201ENST00000512863 1461 ntBASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 AC120498.9-201ENST00000339021 3867 ntBASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC148Q8NFR7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 AC006333.2-201ENST00000607957 2099 ntBASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 AP000974.1-201ENST00000623909 2387 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms