Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 NOC2LP2-201ENST00000407594 1944 ntBASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 AC133041.1-202ENST00000642053 222 ntBASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.6■□□□□ 0.25
DNAAF1Q8NEP3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 AC083880.1-201ENST00000608266 535 ntBASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 ANO7L1-203ENST00000602586 1720 ntBASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DNAAF1Q8NEP3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNAAF1Q8NEP3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 KRT18P16-201ENST00000510337 1294 ntBASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNAAF1Q8NEP3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms