Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COLGALT1Q8NBJ5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COLGALT1Q8NBJ5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COLGALT1Q8NBJ5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 SDHAP1-207ENST00000440850 2000 ntBASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COLGALT1Q8NBJ5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AC036111.1-201ENST00000533973 1582 ntBASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AL023284.2-201ENST00000405850 579 ntBASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.3■□□□□ 0.84
COLGALT1Q8NBJ5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COLGALT1Q8NBJ5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.28■□□□□ 0.84
COLGALT1Q8NBJ5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.27■□□□□ 0.84
COLGALT1Q8NBJ5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms