Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MYC-208ENST00000641036 567 ntBASIC15.3■□□□□ 0.04
LINC00311Q8N616 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.29■□□□□ 0.04
LINC00311Q8N616 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.29■□□□□ 0.04
LINC00311Q8N616 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 AC079598.2-202ENST00000546624 1451 ntBASIC15.29■□□□□ 0.04
LINC00311Q8N616 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00311Q8N616 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC00311Q8N616 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 TSPY17P-201ENST00000450329 467 ntBASIC15.28■□□□□ 0.04
LINC00311Q8N616 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 AL355075.4-201ENST00000554988 638 ntBASIC15.28■□□□□ 0.04
LINC00311Q8N616 AL023803.3-201ENST00000615559 522 ntBASIC15.28■□□□□ 0.04
LINC00311Q8N616 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00311Q8N616 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00311Q8N616 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00311Q8N616 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00311Q8N616 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 AL020996.1-203ENST00000536896 2307 ntBASIC15.27■□□□□ 0.04
LINC00311Q8N616 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00311Q8N616 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 AL023284.2-201ENST00000405850 579 ntBASIC15.27■□□□□ 0.04
LINC00311Q8N616 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00311Q8N616 MCCD1P1-208ENST00000445732 328 ntBASIC15.27■□□□□ 0.04
LINC00311Q8N616 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00311Q8N616 KRT18P41-201ENST00000518924 1277 ntBASIC15.27■□□□□ 0.04
LINC00311Q8N616 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 AP000525.1-201ENST00000608286 694 ntBASIC15.27■□□□□ 0.04
LINC00311Q8N616 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC00311Q8N616 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00311Q8N616 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00311Q8N616 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00311Q8N616 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LINC00311Q8N616 AL357033.4-201ENST00000617703 1807 ntBASIC15.27■□□□□ 0.03
LINC00311Q8N616 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 AC112777.1-201ENST00000540175 1423 ntBASIC15.26■□□□□ 0.03
LINC00311Q8N616 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms