Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 AC083906.6-201ENST00000641366 219 ntBASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 AC093525.10-201ENST00000625130 1569 ntBASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 AC004408.2-201ENST00000623613 2777 ntBASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TTC9CQ8N5M4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 AC116562.2-201ENST00000507042 360 ntBASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CKBP1-201ENST00000565489 1086 ntBASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 AP000692.2-201ENST00000608391 879 ntBASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 AL049637.2-201ENST00000641778 930 ntBASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 LETM1P2-201ENST00000597330 2178 ntBASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TTC9CQ8N5M4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 MESTP1-201ENST00000404287 994 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 NUDT16P1-203ENST00000513809 620 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 AC113410.3-201ENST00000623366 203 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 Z98044.1-201ENST00000632503 1764 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 KRT8P3-201ENST00000519669 1449 ntBASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms