Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SCML4Q8N228 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 KRT18P57-201ENST00000443599 1254 ntBASIC19.6■□□□□ 0.73
SCML4Q8N228 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.6■□□□□ 0.73
SCML4Q8N228 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.6■□□□□ 0.73
SCML4Q8N228 AC006011.2-201ENST00000621313 1158 ntBASIC19.6■□□□□ 0.73
SCML4Q8N228 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.6■□□□□ 0.73
SCML4Q8N228 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCML4Q8N228 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SCML4Q8N228 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCML4Q8N228 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SCML4Q8N228 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.59■□□□□ 0.73
SCML4Q8N228 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.59■□□□□ 0.73
SCML4Q8N228 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCML4Q8N228 AC034236.2-201ENST00000606662 1610 ntBASIC19.59■□□□□ 0.73
SCML4Q8N228 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
SCML4Q8N228 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
SCML4Q8N228 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.59■□□□□ 0.73
SCML4Q8N228 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.59■□□□□ 0.73
SCML4Q8N228 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.59■□□□□ 0.73
SCML4Q8N228 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.59■□□□□ 0.73
SCML4Q8N228 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SCML4Q8N228 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCML4Q8N228 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCML4Q8N228 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.58■□□□□ 0.73
SCML4Q8N228 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCML4Q8N228 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SCML4Q8N228 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCML4Q8N228 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.58■□□□□ 0.73
SCML4Q8N228 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCML4Q8N228 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCML4Q8N228 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.58■□□□□ 0.72
SCML4Q8N228 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.58■□□□□ 0.72
SCML4Q8N228 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SCML4Q8N228 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.58■□□□□ 0.72
SCML4Q8N228 AC117947.1-201ENST00000427448 529 ntBASIC19.58■□□□□ 0.72
SCML4Q8N228 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.58■□□□□ 0.72
SCML4Q8N228 AC104076.2-201ENST00000448912 469 ntBASIC19.58■□□□□ 0.72
SCML4Q8N228 KRT18P21-201ENST00000515767 1272 ntBASIC19.58■□□□□ 0.72
SCML4Q8N228 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.58■□□□□ 0.72
SCML4Q8N228 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCML4Q8N228 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.58■□□□□ 0.72
SCML4Q8N228 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCML4Q8N228 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCML4Q8N228 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SCML4Q8N228 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCML4Q8N228 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCML4Q8N228 AL357033.4-201ENST00000617703 1807 ntBASIC19.58■□□□□ 0.72
SCML4Q8N228 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.57■□□□□ 0.72
SCML4Q8N228 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.57■□□□□ 0.72
SCML4Q8N228 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SCML4Q8N228 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.57■□□□□ 0.72
SCML4Q8N228 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCML4Q8N228 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.57■□□□□ 0.72
SCML4Q8N228 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SCML4Q8N228 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SCML4Q8N228 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 Z98044.1-201ENST00000632503 1764 ntBASIC19.57■□□□□ 0.72
SCML4Q8N228 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SCML4Q8N228 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCML4Q8N228 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCML4Q8N228 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCML4Q8N228 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCML4Q8N228 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCML4Q8N228 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms