Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 AC018445.3-201ENST00000624177 1945 ntBASIC17.49■□□□□ 0.39
BEST3Q8N1M1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 AC125437.2-201ENST00000625180 2167 ntBASIC17.48■□□□□ 0.39
BEST3Q8N1M1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 FAM8A6P-201ENST00000407496 1135 ntBASIC17.48■□□□□ 0.39
BEST3Q8N1M1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 MIR4674-201ENST00000582457 87 ntBASIC17.48■□□□□ 0.39
BEST3Q8N1M1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 AC140113.3-201ENST00000605663 199 ntBASIC17.48■□□□□ 0.39
BEST3Q8N1M1 AL031432.5-201ENST00000641059 760 ntBASIC17.48■□□□□ 0.39
BEST3Q8N1M1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST3Q8N1M1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.47■□□□□ 0.39
BEST3Q8N1M1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.47■□□□□ 0.39
BEST3Q8N1M1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST3Q8N1M1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 Z82202.1-201ENST00000623446 1880 ntBASIC17.46■□□□□ 0.39
BEST3Q8N1M1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms