Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC008608.2-201ENST00000606089 416 ntBASIC27.94■■■□□ 2.06
ABCA6Q8N139 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC27.93■■■□□ 2.06
ABCA6Q8N139 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
ABCA6Q8N139 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 AC073648.2-201ENST00000510116 352 ntBASIC27.92■■■□□ 2.06
ABCA6Q8N139 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ABCA6Q8N139 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
ABCA6Q8N139 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 RNPS1P1-201ENST00000507437 918 ntBASIC27.92■■■□□ 2.06
ABCA6Q8N139 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 IGHV3-41-201ENST00000613121 348 ntBASIC27.92■■■□□ 2.06
ABCA6Q8N139 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
ABCA6Q8N139 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC27.92■■■□□ 2.06
ABCA6Q8N139 AL391422.3-201ENST00000603791 2761 ntBASIC27.91■■■□□ 2.06
ABCA6Q8N139 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ABCA6Q8N139 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ABCA6Q8N139 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ABCA6Q8N139 PPOX-214ENST00000535223 664 ntTSL 3 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ABCA6Q8N139 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
ABCA6Q8N139 AL512353.2-201ENST00000448759 1962 ntBASIC27.9■■■□□ 2.06
ABCA6Q8N139 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 HMGN1P19-201ENST00000436976 333 ntBASIC27.9■■■□□ 2.06
ABCA6Q8N139 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 TCF3P1-201ENST00000423021 1937 ntBASIC27.9■■■□□ 2.06
ABCA6Q8N139 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC27.9■■■□□ 2.06
ABCA6Q8N139 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ABCA6Q8N139 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 COX10-202ENST00000429152 875 ntTSL 2 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 AC064862.7-201ENST00000604520 867 ntBASIC27.89■■■□□ 2.06
ABCA6Q8N139 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 PALM-208ENST00000592155 2272 ntTSL 4 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC27.89■■■□□ 2.06
ABCA6Q8N139 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
ABCA6Q8N139 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC27.89■■■□□ 2.05
ABCA6Q8N139 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
ABCA6Q8N139 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.89■■■□□ 2.05
ABCA6Q8N139 FAM220CP-201ENST00000395253 831 ntBASIC27.89■■■□□ 2.05
ABCA6Q8N139 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC27.89■■■□□ 2.05
ABCA6Q8N139 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC27.89■■■□□ 2.05
ABCA6Q8N139 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
ABCA6Q8N139 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC27.89■■■□□ 2.05
ABCA6Q8N139 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ABCA6Q8N139 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.88■■■□□ 2.05
ABCA6Q8N139 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ABCA6Q8N139 TEX21P-204ENST00000641479 1693 ntBASIC27.88■■■□□ 2.05
ABCA6Q8N139 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ABCA6Q8N139 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ABCA6Q8N139 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ABCA6Q8N139 PGAM5P1-201ENST00000518923 814 ntBASIC27.88■■■□□ 2.05
ABCA6Q8N139 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC27.88■■■□□ 2.05
ABCA6Q8N139 AC005336.2-201ENST00000593183 939 ntBASIC27.88■■■□□ 2.05
ABCA6Q8N139 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms