Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 REXO1L12P-201ENST00000622156 912 ntBASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TSPY7P-201ENST00000431358 1114 ntBASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CCDC116Q8IYX3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 AL512353.2-201ENST00000448759 1962 ntBASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC116Q8IYX3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 AC097488.1-201ENST00000507834 756 ntBASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 AP003071.4-201ENST00000562276 1284 ntBASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 AC083906.6-201ENST00000641366 219 ntBASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC116Q8IYX3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 AL031598.1-201ENST00000561511 1773 ntBASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CCDC116Q8IYX3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC116Q8IYX3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC116Q8IYX3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC116Q8IYX3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC116Q8IYX3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms