Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AC093525.10-201ENST00000625130 1569 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TSPY22P-201ENST00000427496 604 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 NUS1P1-201ENST00000446295 882 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AL136038.4-201ENST00000603606 1261 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AL732292.2-201ENST00000609649 430 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AC112497.1-201ENST00000624824 639 ntBASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEFF1Q8IYR6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 HLA-F-220ENST00000434407 884 ntBASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 EMBP1-201ENST00000458200 901 ntBASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEFF1Q8IYR6 AL391807.1-203ENST00000604392 2365 ntBASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 AP000867.3-201ENST00000524675 377 ntBASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEFF1Q8IYR6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TMEFF1Q8IYR6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms