Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 AC006333.2-201ENST00000607957 2099 ntBASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 FAM210CP-201ENST00000445714 574 ntBASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 AL512604.3-201ENST00000569583 964 ntBASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 MIR3180-5-201ENST00000583743 153 ntBASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 AC083906.6-201ENST00000641366 219 ntBASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
C9orf40Q8IXQ3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
C9orf40Q8IXQ3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 HEIH-201ENST00000623091 1652 ntBASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 WWOX-216ENST00000569818 525 ntBASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 AC141257.4-201ENST00000634557 245 ntBASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 AC136944.6-201ENST00000634818 245 ntBASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf40Q8IXQ3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 TMPOP1-202ENST00000424642 1267 ntBASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf40Q8IXQ3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 AC009947.2-201ENST00000444014 672 ntBASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms