Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 Z98044.1-201ENST00000632503 1764 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 MMP23A-201ENST00000234610 1017 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 HLA-G-202ENST00000376815 851 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 HLA-G-203ENST00000376818 1127 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AC073195.1-201ENST00000607241 877 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AC004264.1-201ENST00000608354 794 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 LTB4R2-202ENST00000528054 3092 ntBASIC17.68■□□□□ 0.42
CCDC71Q8IV32 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71Q8IV32 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 AP002982.1-201ENST00000492365 877 ntBASIC17.67■□□□□ 0.42
CCDC71Q8IV32 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 AL512353.2-201ENST00000448759 1962 ntBASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71Q8IV32 AC068880.1-201ENST00000507289 2297 ntBASIC17.67■□□□□ 0.42
CCDC71Q8IV32 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms