Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR564-202ENST00000385049 94 ntBASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 LINC00265-3P-201ENST00000447588 903 ntBASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 TSPY19P-201ENST00000418461 509 ntBASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 TSPY18P-201ENST00000441642 509 ntBASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 AP000867.3-201ENST00000524675 377 ntBASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 IFNL4P1-201ENST00000607083 540 ntBASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAS4Q8IUM7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 Z83836.1-201ENST00000624605 1642 ntBASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 KRT8P10-201ENST00000450021 1447 ntBASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAS4Q8IUM7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 TOB2P1-201ENST00000469761 992 ntBASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 AC012615.1-201ENST00000565797 1299 ntBASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 AL121772.3-201ENST00000610840 674 ntBASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.18■□□□□ 0.82
NPAS4Q8IUM7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 PVRIG2P-201ENST00000435460 978 ntBASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 AP003733.1-201ENST00000491725 852 ntBASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 MIR3180-4-201ENST00000582223 153 ntBASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms