Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 EMBP1-201ENST00000458200 901 ntBASIC19.97■□□□□ 0.79
RNF135Q8IUD6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF135Q8IUD6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 HBZP1-201ENST00000354915 429 ntBASIC19.96■□□□□ 0.79
RNF135Q8IUD6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 AC104692.2-201ENST00000603054 253 ntBASIC19.96■□□□□ 0.79
RNF135Q8IUD6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF135Q8IUD6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 NUS1P1-201ENST00000446295 882 ntBASIC19.95■□□□□ 0.78
RNF135Q8IUD6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 AL160237.2-201ENST00000556165 472 ntBASIC19.95■□□□□ 0.78
RNF135Q8IUD6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 AL121672.3-201ENST00000608644 468 ntBASIC19.95■□□□□ 0.78
RNF135Q8IUD6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF135Q8IUD6 AC016734.2-201ENST00000624325 1377 ntBASIC19.95■□□□□ 0.78
RNF135Q8IUD6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 BX276092.5-203ENST00000456199 560 ntBASIC19.94■□□□□ 0.78
RNF135Q8IUD6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 AP001271.2-201ENST00000624018 1556 ntBASIC19.94■□□□□ 0.78
RNF135Q8IUD6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF135Q8IUD6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms