Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
RAI1Q7Z5J4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.08■□□□□ 0.17
RAI1Q7Z5J4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 TPSP2-201ENST00000561760 610 ntBASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI1Q7Z5J4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AP002383.4-201ENST00000442518 975 ntBASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AC012615.1-201ENST00000565797 1299 ntBASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AC016734.2-201ENST00000624325 1377 ntBASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AL121672.3-201ENST00000608644 468 ntBASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAI1Q7Z5J4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 RN7SL510P-201ENST00000581311 263 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AL157888.1-201ENST00000631930 593 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AC026396.1-201ENST00000419388 421 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 CHCHD2P8-201ENST00000429873 447 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AC246785.2-201ENST00000432512 513 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 MIR3652-201ENST00000579335 131 ntBASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI1Q7Z5J4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms