Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CYS1Q717R9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CYS1Q717R9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.83■□□□□ 0.61
CYS1Q717R9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
CYS1Q717R9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.83■□□□□ 0.61
CYS1Q717R9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CYS1Q717R9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CYS1Q717R9 AL355802.2-201ENST00000402069 882 ntBASIC18.83■□□□□ 0.6
CYS1Q717R9 KSR1P1-201ENST00000446298 240 ntBASIC18.83■□□□□ 0.6
CYS1Q717R9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.83■□□□□ 0.6
CYS1Q717R9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CYS1Q717R9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CYS1Q717R9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.83■□□□□ 0.6
CYS1Q717R9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CYS1Q717R9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CYS1Q717R9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.82■□□□□ 0.6
CYS1Q717R9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
CYS1Q717R9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.82■□□□□ 0.6
CYS1Q717R9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CYS1Q717R9 AC091390.4-202ENST00000476426 537 ntBASIC18.82■□□□□ 0.6
CYS1Q717R9 KRT18P41-201ENST00000518924 1277 ntBASIC18.82■□□□□ 0.6
CYS1Q717R9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.82■□□□□ 0.6
CYS1Q717R9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.82■□□□□ 0.6
CYS1Q717R9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.82■□□□□ 0.6
CYS1Q717R9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.82■□□□□ 0.6
CYS1Q717R9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 AC026471.1-201ENST00000564629 3026 ntBASIC18.82■□□□□ 0.6
CYS1Q717R9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.82■□□□□ 0.6
CYS1Q717R9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CYS1Q717R9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.82■□□□□ 0.6
CYS1Q717R9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.81■□□□□ 0.6
CYS1Q717R9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 AC068880.1-201ENST00000507289 2297 ntBASIC18.81■□□□□ 0.6
CYS1Q717R9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CYS1Q717R9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
CYS1Q717R9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.81■□□□□ 0.6
CYS1Q717R9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.81■□□□□ 0.6
CYS1Q717R9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CYS1Q717R9 HLA-L-209ENST00000420110 1011 ntBASIC18.81■□□□□ 0.6
CYS1Q717R9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.81■□□□□ 0.6
CYS1Q717R9 RNA5SP413-201ENST00000516373 109 ntBASIC18.81■□□□□ 0.6
CYS1Q717R9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.81■□□□□ 0.6
CYS1Q717R9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.81■□□□□ 0.6
CYS1Q717R9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CYS1Q717R9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CYS1Q717R9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CYS1Q717R9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CYS1Q717R9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms