Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 AL390961.4-201ENST00000623958 2535 ntBASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCD3Q6STE5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 AC135050.7-201ENST00000624508 2218 ntBASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 AL160286.2-201ENST00000567150 934 ntBASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD3Q6STE5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.21■□□□□ 0.34
SMARCD3Q6STE5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.21■□□□□ 0.34
SMARCD3Q6STE5 AC005332.8-201ENST00000622750 2735 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 NBPF21P-201ENST00000425093 1451 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 UNC93B5-201ENST00000530315 699 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 C1QL1P1-201ENST00000568105 661 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 AC104771.1-201ENST00000603335 964 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 AC004264.1-201ENST00000608354 794 ntBASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD3Q6STE5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 OR6D1P-202ENST00000641007 5290 ntBASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 ANO7L1-203ENST00000602586 1720 ntBASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCD3Q6STE5 HLA-A-209ENST00000638375 975 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms