Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TEX21P-204ENST00000641479 1693 ntBASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 AL137013.1-201ENST00000432946 1228 ntBASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
RFWD3Q6PCD5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 TMPOP1-202ENST00000424642 1267 ntBASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 AL353719.1-201ENST00000566847 864 ntBASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFWD3Q6PCD5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 CA15P1-201ENST00000481698 905 ntBASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 AL032819.2-201ENST00000624543 2162 ntBASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFWD3Q6PCD5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 AC073508.3-201ENST00000619697 1419 ntBASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 TSPY17P-201ENST00000450329 467 ntBASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 AP003041.3-201ENST00000527151 707 ntBASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 AC092865.7-201ENST00000641832 219 ntBASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFWD3Q6PCD5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms