Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.25■□□□□ 0.67
CASC4Q6P4E1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 AC093525.10-201ENST00000625130 1569 ntBASIC19.24■□□□□ 0.67
CASC4Q6P4E1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 AC009113.1-201ENST00000570267 2443 ntBASIC19.24■□□□□ 0.67
CASC4Q6P4E1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CASC4Q6P4E1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 TSPY23P-201ENST00000440136 739 ntBASIC19.23■□□□□ 0.67
CASC4Q6P4E1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
CASC4Q6P4E1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.22■□□□□ 0.67
CASC4Q6P4E1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 KRT16P5-201ENST00000455284 522 ntBASIC19.22■□□□□ 0.67
CASC4Q6P4E1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASC4Q6P4E1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms