Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 KRT8P3-201ENST00000519669 1449 ntBASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 AC073912.3-201ENST00000624414 853 ntBASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC144NLQ6NUI1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 EGLN1P1-201ENST00000531623 762 ntBASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CCDC144NLQ6NUI1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 HTR7P1-202ENST00000624664 4411 ntBASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 AL390955.1-201ENST00000428694 934 ntBASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC144NLQ6NUI1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC144NLQ6NUI1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms