Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 AC007613.1-201ENST00000572811 2597 ntBASIC19.76■□□□□ 0.75
RNF43Q68DV7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.76■□□□□ 0.75
RNF43Q68DV7 ATP5G1P1-201ENST00000448724 379 ntBASIC19.76■□□□□ 0.75
RNF43Q68DV7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 ZNF815P-204ENST00000434898 1737 ntBASIC19.76■□□□□ 0.75
RNF43Q68DV7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF43Q68DV7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF43Q68DV7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 CRYGFP-201ENST00000418459 633 ntBASIC19.75■□□□□ 0.75
RNF43Q68DV7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 C2orf69P3-201ENST00000565542 1120 ntBASIC19.75■□□□□ 0.75
RNF43Q68DV7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF43Q68DV7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF43Q68DV7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 UPK3BP1-201ENST00000428678 509 ntBASIC19.74■□□□□ 0.75
RNF43Q68DV7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.74■□□□□ 0.75
RNF43Q68DV7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF43Q68DV7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF43Q68DV7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms