Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 FOSL1P1-201ENST00000511041 816 ntBASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 AC091304.2-201ENST00000564639 760 ntBASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.81■■□□□ 1.4
USPL1Q5W0Q7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 TOB2P1-201ENST00000469761 992 ntBASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 AL160237.2-201ENST00000556165 472 ntBASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
USPL1Q5W0Q7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 PCDHAC2-203ENST00000615316 3011 ntBASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 AL121772.3-201ENST00000610840 674 ntBASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 AC125437.2-201ENST00000625180 2167 ntBASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.79■■□□□ 1.4
USPL1Q5W0Q7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 AFG3L1P-217ENST00000557444 2447 ntBASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 KRT18P31-201ENST00000506277 1292 ntBASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USPL1Q5W0Q7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 AL022342.1-201ENST00000400363 863 ntBASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USPL1Q5W0Q7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USPL1Q5W0Q7 AC012615.1-201ENST00000565797 1299 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms