Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 AL121912.1-201ENST00000603683 238 ntBASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 MIR3180-4-201ENST00000582223 153 ntBASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 LINC01006-201ENST00000333319 2292 ntBASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13DQ5THJ4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 AL109659.2-201ENST00000606809 1674 ntBASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 KRT18P67-201ENST00000432816 1264 ntBASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13DQ5THJ4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms