Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC079602.3-201ENST00000623931 403 ntBASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC112497.1-201ENST00000624824 639 ntBASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 FEM1AP3-201ENST00000403722 1741 ntBASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 HCG4P8-203ENST00000443049 980 ntBASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 AL157888.1-201ENST00000631930 593 ntBASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 AL109659.2-201ENST00000606809 1674 ntBASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNFT1Q5M7Z0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 AL645929.1-201ENST00000420084 975 ntBASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 DUSP5P1-201ENST00000441325 1139 ntBASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNFT1Q5M7Z0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.96■□□□□ 0.3
RNFT1Q5M7Z0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNFT1Q5M7Z0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.96■□□□□ 0.3
RNFT1Q5M7Z0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNFT1Q5M7Z0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.95■□□□□ 0.3
RNFT1Q5M7Z0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms