Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
INO80DQ53TQ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
INO80DQ53TQ3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
INO80DQ53TQ3 RNF165-205ENST00000588679 2904 ntBASIC19.11■□□□□ 0.65
INO80DQ53TQ3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 RCC2P3-201ENST00000418112 1537 ntBASIC19.11■□□□□ 0.65
INO80DQ53TQ3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 ATP5G1P1-201ENST00000448724 379 ntBASIC19.11■□□□□ 0.65
INO80DQ53TQ3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 AC068587.9-201ENST00000641814 219 ntBASIC19.11■□□□□ 0.65
INO80DQ53TQ3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
INO80DQ53TQ3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 KRT8P45-201ENST00000414328 1447 ntBASIC19.1■□□□□ 0.65
INO80DQ53TQ3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 FAM210CP-201ENST00000445714 574 ntBASIC19.1■□□□□ 0.65
INO80DQ53TQ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 MIR3180-5-201ENST00000583743 153 ntBASIC19.1■□□□□ 0.65
INO80DQ53TQ3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 CR769767.2-201ENST00000622735 460 ntBASIC19.1■□□□□ 0.65
INO80DQ53TQ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.1■□□□□ 0.65
INO80DQ53TQ3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
INO80DQ53TQ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
INO80DQ53TQ3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
INO80DQ53TQ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms