Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AC005181.1-201ENST00000604782 1256 ntBASIC16.85■□□□□ 0.29
CCDC58Q4VC31 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
CCDC58Q4VC31 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC58Q4VC31 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC58Q4VC31 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CCDC58Q4VC31 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 AL121906.2-201ENST00000621597 723 ntBASIC16.83■□□□□ 0.28
CCDC58Q4VC31 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC58Q4VC31 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms