Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHMP4BP1P59074 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.52■■□□□ 1.03
CHMP4BP1P59074 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CHMP4BP1P59074 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 AC140113.3-201ENST00000605663 199 ntBASIC21.51■■□□□ 1.03
CHMP4BP1P59074 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP4BP1P59074 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.5■■□□□ 1.03
CHMP4BP1P59074 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 AC010653.2-201ENST00000623505 997 ntBASIC21.5■■□□□ 1.03
CHMP4BP1P59074 AL023973.1-201ENST00000624619 620 ntBASIC21.5■■□□□ 1.03
CHMP4BP1P59074 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP4BP1P59074 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 AL359075.1-203ENST00000462729 1002 ntBASIC21.49■■□□□ 1.03
CHMP4BP1P59074 AL353719.1-201ENST00000566847 864 ntBASIC21.49■■□□□ 1.03
CHMP4BP1P59074 AL023803.3-201ENST00000615559 522 ntBASIC21.49■■□□□ 1.03
CHMP4BP1P59074 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP4BP1P59074 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP4BP1P59074 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AC093484.2-201ENST00000580996 2166 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms