Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN2P57739 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN2P57739 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN2P57739 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN2P57739 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN2P57739 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 RCC2P3-201ENST00000418112 1537 ntBASIC18.61■□□□□ 0.57
CLDN2P57739 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN2P57739 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN2P57739 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 SPDYE13P-201ENST00000445314 798 ntBASIC18.61■□□□□ 0.57
CLDN2P57739 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.61■□□□□ 0.57
CLDN2P57739 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN2P57739 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
CLDN2P57739 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN2P57739 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN2P57739 IRX1P1-201ENST00000438849 1838 ntBASIC18.6■□□□□ 0.57
CLDN2P57739 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.6■□□□□ 0.57
CLDN2P57739 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLDN2P57739 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN2P57739 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN2P57739 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CLDN2P57739 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
CLDN2P57739 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN2P57739 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN2P57739 AC008556.1-201ENST00000610908 2040 ntBASIC18.6■□□□□ 0.57
CLDN2P57739 AL512353.2-201ENST00000448759 1962 ntBASIC18.6■□□□□ 0.57
CLDN2P57739 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN2P57739 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN2P57739 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN2P57739 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN2P57739 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN2P57739 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 AC007952.6-201ENST00000573168 2673 ntBASIC18.59■□□□□ 0.57
CLDN2P57739 AC003957.1-201ENST00000625108 2673 ntBASIC18.59■□□□□ 0.57
CLDN2P57739 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN2P57739 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN2P57739 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN2P57739 KRT18P56-201ENST00000507275 550 ntBASIC18.59■□□□□ 0.57
CLDN2P57739 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN2P57739 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN2P57739 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 FEM1AP3-201ENST00000403722 1741 ntBASIC18.59■□□□□ 0.57
CLDN2P57739 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CLDN2P57739 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN2P57739 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN2P57739 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN2P57739 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN2P57739 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN2P57739 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
CLDN2P57739 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN2P57739 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 HBZP1-201ENST00000354915 429 ntBASIC18.58■□□□□ 0.56
CLDN2P57739 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms