Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA1P56159 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA1P56159 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 HOMER2P1-201ENST00000455653 964 ntBASIC16.89■□□□□ 0.29
GFRA1P56159 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA1P56159 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.89■□□□□ 0.29
GFRA1P56159 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
GFRA1P56159 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA1P56159 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA1P56159 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA1P56159 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GFRA1P56159 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.88■□□□□ 0.29
GFRA1P56159 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.88■□□□□ 0.29
GFRA1P56159 GCSHP2-201ENST00000560971 527 ntBASIC16.88■□□□□ 0.29
GFRA1P56159 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.88■□□□□ 0.29
GFRA1P56159 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GFRA1P56159 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GFRA1P56159 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
GFRA1P56159 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA1P56159 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
GFRA1P56159 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GFRA1P56159 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.87■□□□□ 0.29
GFRA1P56159 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GFRA1P56159 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.87■□□□□ 0.29
GFRA1P56159 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GFRA1P56159 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GFRA1P56159 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GFRA1P56159 AC092647.4-201ENST00000457211 535 ntBASIC16.87■□□□□ 0.29
GFRA1P56159 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA1P56159 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
GFRA1P56159 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 MYC-208ENST00000641036 567 ntBASIC16.87■□□□□ 0.29
GFRA1P56159 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GFRA1P56159 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA1P56159 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA1P56159 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA1P56159 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
GFRA1P56159 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.86■□□□□ 0.29
GFRA1P56159 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA1P56159 ARMC10P1-201ENST00000313754 855 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms