Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKN2DP55273 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.64■□□□□ 0.58
CDKN2DP55273 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDKN2DP55273 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CDKN2DP55273 FAM207BP-201ENST00000447172 505 ntBASIC18.64■□□□□ 0.57
CDKN2DP55273 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKN2DP55273 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CDKN2DP55273 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKN2DP55273 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKN2DP55273 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.63■□□□□ 0.57
CDKN2DP55273 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CDKN2DP55273 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
CDKN2DP55273 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 AL499627.1-201ENST00000569373 2188 ntBASIC18.63■□□□□ 0.57
CDKN2DP55273 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2DP55273 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 AL135905.2-201ENST00000584934 1404 ntBASIC18.63■□□□□ 0.57
CDKN2DP55273 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.63■□□□□ 0.57
CDKN2DP55273 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CDKN2DP55273 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2DP55273 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 AC126763.1-201ENST00000552015 2118 ntBASIC18.62■□□□□ 0.57
CDKN2DP55273 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDKN2DP55273 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKN2DP55273 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2DP55273 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKN2DP55273 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2DP55273 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2DP55273 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2DP55273 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 AC007613.1-201ENST00000572811 2597 ntBASIC18.61■□□□□ 0.57
CDKN2DP55273 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2DP55273 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2DP55273 ABHD17AP1-201ENST00000358206 933 ntBASIC18.61■□□□□ 0.57
CDKN2DP55273 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.61■□□□□ 0.57
CDKN2DP55273 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CDKN2DP55273 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.61■□□□□ 0.57
CDKN2DP55273 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2DP55273 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.61■□□□□ 0.57
CDKN2DP55273 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2DP55273 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDKN2DP55273 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms